avatar

Zhaoyi Sun

Ph.D. Student
Biomedical Informatics and Medical Education,
University of Washington
850 Republican St, Seattle, WA 98109

zhaoyis@uw.edu


About Me

I am a Ph.D. student in Biomedical and Health Informatics at the University of Washington, where I am part of the UW-BioNLP Group, mentored by Dr. Meliha Yetisgen. My current research focuses on applying large language models (LLMs) to medical question answering and error detection in clinical notes. I earned a B.S. in Chemistry from Nanjing University and a M.S. in Health Informatics from Cornell University. While at Weill Cornell Medicine, under the mentorship of Dr. Yifan Peng, I focused on evaluating LLMs on various clinical tasks, including radiology report generation, and evidence summarization. I am also interested in multimodal deep learning with biomedical images and text. My research goal is to enhance the efficiency and effectiveness of natural language processing techniques in clinical domains.

Research Interests

News

Publications

    Journal Articles

  1. Rad. AI
    Improving Fairness of Automated Chest X-ray Diagnosis by Contrastive Learning
    Mingquan Lin, Tianhao Li, Zhaoyi Sun, Gregory Holste, Ying Ding, Fei Wang, George Shih, Yifan Peng
    Radiology: Artificial Intelligence, 2024.
    Website Code BibTex

  2. Front. Psychiatry
    Automated classification of lay health articles using natural language processing: a case study on pregnancy health and postpartum depression
    Braja Gopal Patra*, Zhaoyi Sun*, Zilin Cheng*, Praneet Kasi Reddy Jagadeesh Kumar, Abdullah Altammami, Yiyang Liu, Rochelle Joly, Caroline Jedlicka, Diana Delgado, Jyotishman Pathak, Yifan Peng, Yiye Zhang (*co-first author)
    Frontiers in Psychiatry, 2023.
    Website PDF Code BibTex

  3. JBI
    A scoping review on multimodal deep learning in biomedical images and texts
    Zhaoyi Sun, Mingquan Lin, Qingqing Zhu, Qianqian Xie, Fei Wang, Zhiyong Lu, Yifan Peng
    Journal of Biomedical Informatics (JBI), 2023.
    Website PDF BibTex

  4. npj Digit. Med.
    Evaluating large language models on medical evidence summarization
    Liyan Tang, Zhaoyi Sun, Betina Idnay, Jordan G. Nestor, Ali Soroush, Pierre A. Elias, Ziyang Xu, Ying Ding, Greg Durrett, Justin F. Rousseau, Chunhua Weng, Yifan Peng
    npj Digital Medicine, 2023.
    Website PDF BibTex

  5. JAMIA
    An NLP approach to identify SDoH-related circumstance and suicide crisis from death investigation narratives
    Song Wang, Yifang Dang, Zhaoyi Sun, Ying Ding, Jyotishman Pathak, Cui Tao, Yunyu Xiao, Yifan Peng
    Journal of the American Medical Informatics Association (JAMIA), 2023.
    Website Code BibTex

  6. Radiology
    Evaluating GPT-4 on impressions generation in radiology reports
    Zhaoyi Sun*, Hanley Ong*, Patrick Kennedy, Liyan Tang, Shirley Chen, Jonathan Elias, Eugene Lucas, George Shih, Yifan Peng (*co-first author)
    Radiology, 2023.
    Website BibTex

  7. J. Control. Release
    Maintaining manganese in tumor to activate cGAS-STING pathway evokes a robust abscopal anti-tumor effect
    Chao Wang, Zhaoyi Sun, Chenxuan Zhao, Zhewei Zhang, Haoran Wang, Yang Liu, Yunfei Guo, Bingtao Zhang, Lihong Gu, Yue Yu, Yiqiao Hu, Jinhui Wu
    Journal of Controlled Release, 2021.
    Website BibTex

  8. J. Pharm. Biomed. Anal.
    Using HPLC to analyze (S)-oxiracetam and four related substances in the bulk drug of (S)-oxiracetam
    Chao Wang, Hong Dong, Honghui Liu, Zhaoyi Sun, Ahu Yuan, Jinhui Wu, Yiqiao Hu
    Journal of Pharmaceutical and Biomedical Analysis, 2020.
    Website BibTex

  9. Mol. Pharm.
    Hydrogel-based controlled drug delivery for cancer treatment: a review
    Zhaoyi Sun*, Chengjun Song*, Chao Wang, Yiqiao Hu, Jinhui Wu (*co-first author)
    Molecular Pharmaceutics, 2020.
    Website BibTex

    10. Conference Papers

  10. MICCAI
    Dermavqa: A multilingual visual question answering dataset for dermatology
    Wen-wai Yim, Yujuan Fu, Zhaoyi Sun, Asma Ben Abacha, Meliha Yetisgen, Fei Xia
    International Conference on Medical Image Computing and Computer-Assisted Intervention, 2024.
    Website BibTex

  11. clinicalnlp
    Overview of the MEDIQA-M3G 2024 Shared Task on Multilingual Multimodal Medical Answer Generation
    Wen-wai Yim, Asma Ben Abacha, Yujuan Fu, Zhaoyi Sun, Fei Xia, Meliha Yetisgen, Martin Krallinger
    Proceedings of the 6th Clinical Natural Language Processing Workshop, 2024.
    Website PDF BibTex

  12. clinicalnlp
    Overview of the MEDIQA-CORR 2024 Shared Task on Medical Error Detection and Correction
    Asma Ben Abacha, Wen-wai Yim, Yujuan Fu, Zhaoyi Sun, Fei Xia, Meliha Yetisgen
    Proceedings of the 6th Clinical Natural Language Processing Workshop, 2024.
    Website PDF BibTex

  13. CLEF
    Overview of the MEDIQA-MAGIC Task at ImageCLEF 2024: Multimodal And Generative TelemedICine in Dermatology
    Wen-wai Yim, Asma Ben Abacha, Yujuan Fu, Zhaoyi Sun, Meliha Yetisgen, Fei Xia
    Conference and Labs of the Evaluation Forum, 2024.
    Website PDF BibTex

    14. Posters and Presentations

  14. ICHI
    An Enhanced Multimodal Multilingual Dataset for Medical Misinformation Detection
    Zhaoyi Sun, Yujuan Fu, Wen-wai Yim, Meliha Yetisgen, Fei Xia
    The 12th IEEE International Conference on Healthcare Informatics, 2024.
    Website PDF Doctoral Consortium

  15. AMIA
    Innovative Analysis of Social Determinants to Enhance Suicide Prevention for Black Youth
    Zhaoyi Sun, Song Wang, Ying Ding, Yongkang Zhang, Jyotishman Pathak, Yifan Peng, Yunyu Xiao
    AMIA 2023 Annual Symposium, 2023.
    Website PDF Podium Abstract

Services

Journal Reviewers

Conference Reviewers

Membership


Powered by Jekyll and Minimal Light theme.